| 2024 |
ABAG-docking benchmark: a non-redundant structure benchmark dataset for antibody–antigen computational docking |
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| 2024 |
BDM: An Assessment Metric for Protein Complex Structure Models Based on Distance Difference Matrix |
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News Report |
| 2024 |
Interferon-inducedtransmembrane protein-1 competitively blocks Ephrin receptor A2-mediated Epstein-Barr virus entryinto epithelial cells |
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| 2023 |
DSR: Dynamical Surface Representation as Implicit Neural Networks for Protein |
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News Report |
| 2022 |
Nan Zhao, Maji Zhuo, Kun Tian, Xinqi Gong*. Protein-protein interaction and non-interaction predictions using gene sequence natural vector.Communications Biology. 2022 July 2;5(1):652. doi: 10.1038/s42003-022-03617-0. |
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| 2020 |
Xinghen Yu, Xinqi Gong*, Hao Jiang*.Heterogeneous multiple kernel learning for breast cancer outcome evaluation.BMC Bioinformatics. 2020.doi:10.1186/s12859-020-3483-0 |
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| 2020 |
DaiwenSun, Xinqi Gong*. Tetramer protein complex interface residue pairs prediction with LSTM combined with graph representations. Biochimica et Biophysica Acta(BBA) - Proteins and Proteomics. 2020. 1868(11):14054. doi: 10.1016/j.bbapap.2020.140504. |
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| 2020 |
Hongmei Yang, Qin Peng, Jun Zhou, Guojun Song, Xinqi Gong*. The unidirectional causality influence of factors on PM2.5 in Shenyang city of China.Scientific Reports. 2020 |
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| 2020 |
Jian Li, William Terzaghi, Yanyan Gong, Congran Li, Jun-Jie Ling, Yangyang Fan, Nanxun Qin, Xinqi Gong.*,Danmeng Zhu*, Xingwang Deng*. Modulation of BIN2 kinase activity by HY5 controls hypocotyl elongation in the light. Nature Communications. Nature Communications, 2020; doi: 10.1038/s41467-020-15394-7. | Link | |
| 2020 | He Huang, Xinqi Gong*. A Review of Protein Inter-Residue Distance Prediction.Current Bioinformatics.. 2020. doi:10.2174/1574893615999200425230056 | Link | |
| 2020 | Yu Chen, Wei Wang*, Jiale Liu, Jinping Feng, Xinqi Gong*. Protein interface complementarity and gene duplication improve link prediction of protein-protein interaction network.Frontiers in Genetics, section Bioinformatics and Computational Biology. 2020. doi:10.3389/fgene.2020.00291. | Link | |
| 2020 | Yanfen Lyu, He Huang, Xinqi Gong*. A novel index of contact frequency from noise protein-protein interaction data help for accurate interface residue pair prediction.Interdisciplinary Sciences: Computational Life Sciences. 2020.doi:10.1007/s12539-020-00364-w. | Link | |
| 2020 | Biochimica. 2020. 1868(11):14054. | Link | |
| 2019 | Zhenni Zhao, Xinqi Gong*. Protein-protein interaction interface residue pair prediction based on deep learning architecture.IEEE-ACM Transactions on Computational Biology and Bioinformatics. 2019. doi:10.1145/3307339.3343864 | Link | |
| 2019 | Jiale Liu,Xinqi Gong.* Attention mechanism enhanced LSTM with residual architecture and its application for protein-protein interaction residue pair prediction. BMC Bioinformatics, 2019: 16(5):1753-1759. | Link | |
| 2019 | Fang Kong, Xirong Li, Qing Liu, Chuangye Yan, Xinqi Gong*. An automatic particle picking method based on generative adversarial network.Communications in Information and Systems. 2019. doi: | Link | |